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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5892292_5892722_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5892292 - 5892722

Intron Length:

431

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGGGGC

5'SS Class:

major

3'SS Sequence:

ATTGCTCCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCGTGAA

U12 Branch Point Sequence:

TTGTCGTGAAAA

Flanking Amino Acid:

EKTRHAFTLLGVKESHQMAI

Intron Amino Acid Position:

318

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

64.8

41.3

Major BPS

59.5

0.24

1.3

51.3

44.2

Major PPT

68.1

0.41

0.8

59.5

37.5

Minor 5ss

30.1

-2.3

3.5

41.6

45.3

Minor BPS

50.2

2.3

69.63

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038315

5882428 - 5941475

59048

ENSAPLT00000030573

5880697 - 5941475

60779

ENSAPLT00000005678

5879099 - 5941475

62377