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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5892829_5894012_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5892829 - 5894012

Intron Length:

1184

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTCGGTAGG

5'SS Class:

weak_major

3'SS Sequence:

CTTGCCCGCAGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GAGTCAG

U12 Branch Point Sequence:

TTGCCCGCAGAG

Flanking Amino Acid:

ESERDGEACSIEDEHLNHFC

Intron Amino Acid Position:

344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.19

1.4

56.6

47.9

Major BPS

44.2

-0.3

1.7

49.1

46.3

Major PPT

48.1

-0.1

1.7

53.1

36.8

Minor 5ss

31.6

-2.1

2.9

37.9

Minor BPS

38.5

-1

2.3

46.59

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038315

5882428 - 5941475

59048