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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5892833_5894010_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5892833 - 5894010

Intron Length:

1178

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAGGTCAC

5'SS Class:

major

3'SS Sequence:

TGCTTGCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGTCAG

U12 Branch Point Sequence:

TTCTGCTTGCCC

Flanking Amino Acid:

ERDGEACSMSSEDEHLNHFC

Intron Amino Acid Position:

355

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.1

63.6

42.9

Major BPS

44.2

-0.3

1.7

49.1

46.3

Major PPT

71.9

0.49

0.9

65.5

36.1

Minor 5ss

33.6

-1.9

3.2

44.4

43.5

Minor BPS

-0.5

3.7

69.28

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030573

5880697 - 5941475

60779

ENSAPLT00000005678

5879099 - 5941475

62377