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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5894277_5895939_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5894277 - 5895939

Intron Length:

1663

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGCCTC

5'SS Class:

major

3'SS Sequence:

CATTGCTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

GATTTATTCATT

Flanking Amino Acid:

HSFIGVLDIYGFETFEVNSF

Intron Amino Acid Position:

443

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.2

47.1

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

79.8

0.67

0.9

36.9

Minor 5ss

40.6

-1

3.4

50.7

Minor BPS

49.3

0.02

70.66

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030573

5880697 - 5941475

60779

ENSAPLT00000005678

5879099 - 5941475

62377

ENSAPLT00000038315

5882428 - 5941475

59048