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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5896022_5897467_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5896022 - 5897467

Intron Length:

1446

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGGTCG

5'SS Class:

major

3'SS Sequence:

TGCCCAACCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAC

U12 Branch Point Sequence:

CAATCACTAACT

Flanking Amino Acid:

NEKLQQQFNSHVFKLEQEEY

Intron Amino Acid Position:

471

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

64.4

42.4

Major BPS

64.5

0.36

65.2

28.2

Major PPT

63.8

0.31

0.9

59.3

35.8

Minor 5ss

37.5

-1.4

3.2

48.8

46.9

Minor BPS

53.2

0.18

72.55

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038315

5882428 - 5941475

59048

ENSAPLT00000030573

5880697 - 5941475

60779

ENSAPLT00000005678

5879099 - 5941475

62377