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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5897609_5901831_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5897609 - 5901831

Intron Length:

4223

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAGAGG

5'SS Class:

major

3'SS Sequence:

CATCCCCGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTTGGGTCAAAG

Flanking Amino Acid:

ILDLLDEECKVPKGTDQNWA

Intron Amino Acid Position:

518

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.1

57.6

46.8

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

69.6

0.44

0.9

65.8

35.6

Minor 5ss

29.6

-2.3

3.4

39.2

46.3

Minor BPS

39.5

-0.9

2.6

52.48

47.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030573

5880697 - 5941475

60779

ENSAPLT00000005678

5879099 - 5941475

62377