Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_58983448_59062864_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58983448 - 59062864

Intron Length:

79417

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTAAT

5'SS Class:

strong_major

3'SS Sequence:

AATATTTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATGTTTTTAATA

Flanking Amino Acid:

YLVSCKITDYALIAIGRYSM

Intron Amino Acid Position:

403

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

0.9

81.4

31.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.67

0.9

73.1

41.2

Minor 5ss

43.6

-0.7

2.6

56.3

42.5

Minor BPS

0.66

1.1

72.62

33.8

Associated Gene:

Gene:

FBXL17

Ensembl Gene ID:

ENSAPLG00000010940

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040821

58967903 - 59277010

309108