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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5903186_5904210_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5903186 - 5904210

Intron Length:

1025

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TCTTGCCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

GGGTGCTCAGTC

Flanking Amino Acid:

EQINILKASKYQMVADLFQD

Intron Amino Acid Position:

587

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.6

1.07

0.7

84.1

26.6

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

84.3

0.77

0.8

81.1

Minor 5ss

-1.9

3.1

41.6

Minor BPS

42.1

-0.6

48.11

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030573

5880697 - 5941475

60779

ENSAPLT00000005678

5879099 - 5941475

62377