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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5904745_5906778_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5904745 - 5906778

Intron Length:

2034

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGGC

5'SS Class:

major

3'SS Sequence:

CGTATCGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

TCATCTCCATCC

Flanking Amino Acid:

IKPNDEKLPFKFDPKRAVQQ

Intron Amino Acid Position:

669

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

0.9

69.4

35.6

Major BPS

0.87

0.8

85.6

Major PPT

72.6

0.51

65.2

Minor 5ss

29.3

-2.4

3.1

34.7

35.3

Minor BPS

44.2

-0.4

56.03

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038315

5882428 - 5941475

59048

ENSAPLT00000005678

5879099 - 5941475

62377