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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5912371_5913225_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5912371 - 5913225

Intron Length:

855

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTGG

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTTGAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

GTTTCCTTTATG

Flanking Amino Acid:

CQTLLEDLIKDPDKFQFGRT

Intron Amino Acid Position:

736

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

65.8

42.7

Major BPS

73.8

0.59

0.9

26.8

Major PPT

60.4

0.23

1.2

63.6

Minor 5ss

37.8

-1.4

46.8

48.5

Minor BPS

68.5

0.44

1.7

72.36

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038315

5882428 - 5941475

59048

ENSAPLT00000005678

5879099 - 5941475

62377