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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5913438_5915210_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5913438 - 5915210

Intron Length:

1773

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

CCGTGCTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TTATCTTTGATT

Flanking Amino Acid:

QRYARGHLARRLAEHLRRTR

Intron Amino Acid Position:

806

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

80.5

33.9

Major BPS

0.85

0.9

39.9

Major PPT

75.3

0.57

0.9

68.4

37.3

Minor 5ss

31.4

-2.1

2.9

42.1

44.5

Minor BPS

77.6

0.95

87.42

31.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038315

5882428 - 5941475

59048

ENSAPLT00000005678

5879099 - 5941475

62377