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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5915368_5916409_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5915368 - 5916409

Intron Length:

1042

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCTC

5'SS Class:

major

3'SS Sequence:

TTGTGTTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

TCTCCCCTGATT

Flanking Amino Acid:

GMFVRRIYRQVLAEHKATIL

Intron Amino Acid Position:

859

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

68.9

38.9

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

73.9

0.54

1.1

74.5

39.3

Minor 5ss

33.9

-1.8

3.7

49.6

Minor BPS

0.39

1.7

77.5

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038315

5882428 - 5941475

59048

ENSAPLT00000005678

5879099 - 5941475

62377