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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5916650_5919214_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5916650 - 5919214

Intron Length:

2565

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTCCC

5'SS Class:

strong_major

3'SS Sequence:

GTGCCGGCCGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTTAC

U12 Branch Point Sequence:

TTCTTCTTTTTT

Flanking Amino Acid:

VQLQRKIDEQNKEYKLLNEQ

Intron Amino Acid Position:

939

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

70.6

37.9

Major BPS

66.4

0.41

1.1

57.4

41.4

Major PPT

58.1

0.18

49.9

39.3

Minor 5ss

34.1

-1.8

3.1

44.9

43.1

Minor BPS

43.2

-0.4

3.5

74.73

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038315

5882428 - 5941475

59048

ENSAPLT00000005678

5879099 - 5941475

62377