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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5919459_5921943_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5919459 - 5921943

Intron Length:

2485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTGTGTTAA

5'SS Class:

weak_major

3'SS Sequence:

GACCTGGAAGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCGTAT

U12 Branch Point Sequence:

TATCTCCGACCT

Flanking Amino Acid:

VKEKDLLRKVQNALLKQEKE

Intron Amino Acid Position:

968

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.3

0.2

1.3

59.9

37.3

Major BPS

-0.1

1.4

43.1

41.5

Major PPT

45.5

-0.2

1.1

38.2

37.8

Minor 5ss

41.1

-1

2.7

43.5

44.5

Minor BPS

45.6

-0.2

68.29

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038315

5882428 - 5941475

59048