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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5922814_5923593_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5922814 - 5923593

Intron Length:

780

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACGAAG

5'SS Class:

major

3'SS Sequence:

TGCTCCTTGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTAAAC

U12 Branch Point Sequence:

TGCTCCTTGACA

Flanking Amino Acid:

NLRDEMTIIKQAPGHRRNPS

Intron Amino Acid Position:

1097

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

1.2

69.6

42.7

Major BPS

60.1

0.25

1.1

68.6

33.3

Major PPT

72.4

0.5

68.1

37.6

Minor 5ss

37.2

-1.5

3.1

47.8

47.9

Minor BPS

78.8

0.9

1.1

79.41

36.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038315

5882428 - 5941475

59048

ENSAPLT00000005678

5879099 - 5941475

62377