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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5923696_5924018_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5923696 - 5924018

Intron Length:

323

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGATTCAG

5'SS Class:

major

3'SS Sequence:

CGTTTAAAGAGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

GGGACATTAAAA

Flanking Amino Acid:

STSEIGDTEDFLLQEVGTDK

Intron Amino Acid Position:

1070

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.1

0.4

1.1

59.8

40.6

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

45.4

-0.2

1.8

47.6

43.3

Minor 5ss

30.6

-2.2

2.9

36.8

40.5

Minor BPS

48.9

-0

1.8

56.9

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038315

5882428 - 5941475

59048