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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5923714_5924030_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5923714 - 5924030

Intron Length:

317

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGGCTG

5'SS Class:

major

3'SS Sequence:

GTTTCTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAA

U12 Branch Point Sequence:

GGGACATTAAAA

Flanking Amino Acid:

DTEDVIQQVEEVGTDKAAMD

Intron Amino Acid Position:

1137

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.1

64.5

46.9

Major BPS

72.6

0.56

1.2

75.9

36.3

Major PPT

87.3

0.84

0.7

85.2

29.6

Minor 5ss

33.3

-1.9

3.6

46.8

48.5

Minor BPS

48.9

-0

1.8

56.9

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005678

5879099 - 5941475

62377