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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5924155_5924854_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5924155 - 5924854

Intron Length:

700

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAA|GCAAGAAAG

5'SS Class:

major

3'SS Sequence:

AGTTTGTGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

GAGCTTTTGATG

Flanking Amino Acid:

QTQLEKKEQESFPLQSSELR

Intron Amino Acid Position:

1115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

67.6

43.5

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

67.7

0.4

62.3

43.8

Minor 5ss

24.2

-3

3.7

31.8

Minor BPS

47.7

-0.3

1.3

44.26

35.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038315

5882428 - 5941475

59048