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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5924163_5925384_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5924163 - 5925384

Intron Length:

1222

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAA|GCCCAGGTA

5'SS Class:

weak_major

3'SS Sequence:

TCAACCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TCCTCTTTAATA

Flanking Amino Acid:

LEKKEQESKKVIETKTEMTS

Intron Amino Acid Position:

1181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.2

0.05

1.2

56.9

37.1

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

70.3

0.46

0.9

62.6

34.2

Minor 5ss

17.9

-3.7

4.2

41.9

Minor BPS

74.9

0.78

1.2

74.34

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005678

5879099 - 5941475

62377