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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5924890_5928136_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5924890 - 5928136

Intron Length:

3247

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGG|GCAATGTGT

5'SS Class:

major

3'SS Sequence:

TGGTGTTTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TTTCGCTCAATC

Flanking Amino Acid:

PLQSSELRYRRQELESENKK

Intron Amino Acid Position:

1127

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.2

0.38

1.3

59.8

44.9

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

78.2

0.64

69.2

46.1

Minor 5ss

27.8

-2.6

4.2

38.3

46.7

Minor BPS

55.9

0.17

72.19

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038315

5882428 - 5941475

59048