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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5925448_5928136_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5925448 - 5928136

Intron Length:

2689

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGAG

5'SS Class:

strong_major

3'SS Sequence:

TGGTGTTTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TTTCGCTCAATC

Flanking Amino Acid:

HEDFAYNSLKRQELESENKK

Intron Amino Acid Position:

1202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

68.4

38.7

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

78.2

0.64

69.2

46.1

Minor 5ss

30.2

-2.3

3.3

36.8

47.7

Minor BPS

55.9

0.17

72.19

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005678

5879099 - 5941475

62377