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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5928377_5928919_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5928377 - 5928919

Intron Length:

543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAAGGAG

5'SS Class:

major

3'SS Sequence:

GTGTTGAATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAA

U12 Branch Point Sequence:

TCGTGTTGAATT

Flanking Amino Acid:

AQQKEPGKNTEPITSPASWP

Intron Amino Acid Position:

1282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.1

57.6

41.5

Major BPS

0.55

1.1

63.4

44.3

Major PPT

63.1

0.3

1.1

60.1

45.1

Minor 5ss

28.4

-2.5

3.6

37.5

47.3

Minor BPS

0.08

1.9

67.85

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005678

5879099 - 5941475

62377