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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5929018_5933200_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5929018 - 5933200

Intron Length:

4183

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGCGCG

5'SS Class:

major

3'SS Sequence:

CCTTTATTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTTAT

U12 Branch Point Sequence:

TGTCCTTTATTT

Flanking Amino Acid:

EAYQGICETNRKTEDWGYLN

Intron Amino Acid Position:

1314

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

1.1

Major BPS

71.5

0.54

1.1

63.3

42.8

Major PPT

80.9

0.7

0.8

73.4

36.1

Minor 5ss

37.1

-1.5

3.3

48.8

46.9

Minor BPS

62.8

0.48

1.6

78.04

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005678

5879099 - 5941475

62377