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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5933279_5934446_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5933279 - 5934446

Intron Length:

1168

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAACCGC

5'SS Class:

major

3'SS Sequence:

GTCCTTTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATAAAT

U12 Branch Point Sequence:

AAATCCCTGATG

Flanking Amino Acid:

LAYQGLKQVARLLEAQLQDQ

Intron Amino Acid Position:

1340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.9

0.28

1.4

51.3

45.9

Major BPS

65.7

0.39

71.3

30.3

Major PPT

81.4

0.71

0.8

79.7

32.2

Minor 5ss

-1.9

42.9

44.1

Minor BPS

50.6

-0.1

1.7

55.37

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038315

5882428 - 5941475

59048

ENSAPLT00000005678

5879099 - 5941475

62377