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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5934646_5935110_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5934646 - 5935110

Intron Length:

465

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGAC

5'SS Class:

strong_major

3'SS Sequence:

TTCCGTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTATCTTTAAAC

Flanking Amino Acid:

EITRLTNENLDLKEMLEKLE

Intron Amino Acid Position:

1407

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

71.3

32.5

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

84.2

0.77

0.8

76.1

37.8

Minor 5ss

30.9

-2.2

3.4

38.5

41.1

Minor BPS

76.3

0.81

1.3

80.67

33.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038315

5882428 - 5941475

59048

ENSAPLT00000005678

5879099 - 5941475

62377