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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5935205_5935946_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5935205 - 5935946

Intron Length:

742

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAATTGG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TCACCCTCATTT

Flanking Amino Acid:

IYMKKVQDFEAYQAMVPEER

Intron Amino Acid Position:

1438

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

68.2

39.6

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

0.9

0.6

22.5

Minor 5ss

33.5

-1.9

2.9

40.6

45.6

Minor BPS

49.3

0.03

1.8

66.66

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005678

5879099 - 5941475

62377