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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5936091_5936516_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5936091 - 5936516

Intron Length:

426

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAGT

5'SS Class:

strong_major

3'SS Sequence:

TCAAACCTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAA

U12 Branch Point Sequence:

TCACTATCAAAC

Flanking Amino Acid:

EPLLIRNLITDLKPQAVAAT

Intron Amino Acid Position:

1486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.8

78.6

37.3

Major BPS

78.5

0.71

0.9

69.7

37.1

Major PPT

65.3

0.35

0.9

55.2

40.7

Minor 5ss

28.5

-2.5

3.1

39.7

45.9

Minor BPS

43.9

-0.4

1.8

51.49

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038315

5882428 - 5941475

59048

ENSAPLT00000005678

5879099 - 5941475

62377