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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5936669_5936875_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5936669 - 5936875

Intron Length:

207

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTGCTCCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

AGGCTCTGACGT

Flanking Amino Acid:

TINGIKKVLKKHNDDFEMTS

Intron Amino Acid Position:

1537

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

76.2

39.9

Major BPS

69.1

0.47

60.7

37.6

Major PPT

82.8

0.74

0.8

74.1

36.6

Minor 5ss

40.9

-1

3.7

63.6

48.1

Minor BPS

41.6

-0.5

1.9

52.92

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038315

5882428 - 5941475

59048

ENSAPLT00000005678

5879099 - 5941475

62377