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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_59400360_59405688_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59400360 - 59405688

Intron Length:

5329

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

GTATGTCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAC

U12 Branch Point Sequence:

ATTTCTGTAATG

Flanking Amino Acid:

NNLTAESLQVTLKTVIEELM

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

1.3

81.8

38.5

Major BPS

82.3

0.8

83.6

25.8

Major PPT

76.5

0.6

41.8

Minor 5ss

41.5

-0.9

3.1

58.6

39.2

Minor BPS

59.4

0.16

69.15

39.1

Associated Gene:

Gene:

FER

Ensembl Gene ID:

ENSAPLG00000010838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011317

59361360 - 59538902

177543