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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5940050_5940540_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5940050 - 5940540

Intron Length:

491

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGCCGA

5'SS Class:

major

3'SS Sequence:

TGCATTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTGCAT

U12 Branch Point Sequence:

CTTTGTTGCATT

Flanking Amino Acid:

VCSWSTGMQLRFNISQLEEW

Intron Amino Acid Position:

1712

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

55.9

44.9

Major BPS

57.3

0.18

1.6

71.4

45.1

Major PPT

70.9

0.47

0.9

61.9

39.8

Minor 5ss

30.4

-2.2

3.2

38.4

46.6

Minor BPS

-0.3

2.2

67.73

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038315

5882428 - 5941475

59048

ENSAPLT00000005678

5879099 - 5941475

62377