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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_59405812_59410909_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59405812 - 59410909

Intron Length:

5098

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTGGA

5'SS Class:

major

3'SS Sequence:

TTTTTCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGCATTTTAAAA

Flanking Amino Acid:

ESSKTCEKKSDIVLLLSQKQ

Intron Amino Acid Position:

349

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

66.1

40.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

96.2

1.04

0.5

92.4

17.6

Minor 5ss

33.3

-1.9

3.2

36.6

41.7

Minor BPS

55.4

0.17

1.4

61.45

38.6

Associated Gene:

Gene:

FER

Ensembl Gene ID:

ENSAPLG00000010838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011317

59361360 - 59538902

177543