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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5940716_5940877_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5940716 - 5940877

Intron Length:

162

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTCCGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TTGCCTGTAACC

Flanking Amino Acid:

SLCTALTTQQIVKILNLYTP

Intron Amino Acid Position:

649

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

76.7

33.9

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

76.4

0.59

73.2

37.3

Minor 5ss

29.2

-2.4

2.8

33.9

41.6

Minor BPS

57.4

0.21

71.37

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038315

5882428 - 5941475

59048

ENSAPLT00000030573

5880697 - 5941475

60779