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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_59447657_59451900_F


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
59447657 - 59451900

Intron Length:
4244

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAT|GTACGTCTC

5'SS Class:
major

3'SS Sequence:
TACCTCCATACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTTAC

U12 Branch Point Sequence:
TTTCCTTTTACC

Flanking Amino Acid:
RRHFIIQYADNQYRFEGTGF

Intron Amino Acid Position:
512

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.1
0.57
1.1
69.3
41.6

Major BPS
74.2
0.6
1
67
39.4

Major PPT
72.2
0.5
0.9
65.6
34.8

Minor 5ss
40.1
-1.1
3.3
57.5
40.3

Minor BPS
69.6
0.6
1.6
80.33
34.2

Associated Gene:

Gene:
FER

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

59361360 - 59538902
177543