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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_59480648_59497837_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59480648 - 59497837

Intron Length:

17190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTTTA

5'SS Class:

strong_major

3'SS Sequence:

TCTGCTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTCTAT

U12 Branch Point Sequence:

TATCTGTCAAGT

Flanking Amino Acid:

PIYIVMELVPGGDFLSFLRK

Intron Amino Acid Position:

642

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

Major BPS

0.37

1.3

64.5

42.5

Major PPT

80.5

0.69

0.8

37.3

Minor 5ss

43.8

-0.7

2.8

58.6

45.8

Minor BPS

-0.3

2.4

66.43

Associated Gene:

Gene:

FER

Ensembl Gene ID:

ENSAPLG00000010838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011317

59361360 - 59538902

177543