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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_59597747_59599072_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59597747 - 59599072

Intron Length:

1326

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTGAA

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTCTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTGAA

U12 Branch Point Sequence:

ATGTGAATGACC

Flanking Amino Acid:

KLCVTLWLQKSGTCPICRHV

Intron Amino Acid Position:

605

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

79.5

28.5

Major BPS

63.3

0.33

1.2

55.1

42.1

Major PPT

84.4

0.77

0.7

80.6

24.7

Minor 5ss

32.1

-2

3.1

40.5

45.7

Minor BPS

43.6

-0.5

2.2

58.17

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011350

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011803

59597552 - 59613867

16316