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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_59658805_59684881_R

Intron Information:

Intron Rank:

150518

Intron Class:

major

Intron Phase:

Intron Coordinates:

59658805 - 59684881

Intron Length:

26077

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCAAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTATTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTCTTCTTAAGA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

75.9

35.2

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

82.4

0.73

0.8

74.9

39.5

Minor 5ss

44.8

-0.6

2.6

56.7

47.6

Minor BPS

71.4

0.67

1.6

78.35

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028460

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024516

59658723 - 59694631

35909