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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_59776157_59780198_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59776157 - 59780198

Intron Length:

4042

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGCA

5'SS Class:

strong_major

3'SS Sequence:

AATTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTAATTTTAATT

Flanking Amino Acid:

MNAHPELHVKAQFGTLSDYF

Intron Amino Acid Position:

461

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

77.4

30.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.9

0.79

0.8

34.7

Minor 5ss

32.3

-2

3.2

41.6

Minor BPS

64.4

0.53

1.2

73.77

37.2

Associated Gene:

Gene:

MAN2A1

Ensembl Gene ID:

ENSAPLG00000011352

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011917

59732446 - 59862554

130109