Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_60322451_60323017_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

60322451 - 60323017

Intron Length:

567

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

CTTGGGGAGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

AACACCTTCATT

Flanking Amino Acid:

ITNGADNAIRVWIFDGPGGT

Intron Amino Acid Position:

305

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.9

30.2

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

52.2

0.05

1.2

46.3

45.1

Minor 5ss

41.4

-1

2.9

49.9

46.4

Minor BPS

53.8

0.2

1.8

68.17

42.8

Associated Gene:

Gene:

WDR36

Ensembl Gene ID:

ENSAPLG00000012829

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028871

60312181 - 60344340

32160

ENSAPLT00000013451

60312831 - 60344340

31510