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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_6032792_6033048_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6032792 - 6033048

Intron Length:

257

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAAGC

5'SS Class:

strong_major

3'SS Sequence:

GTTGCCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAA

U12 Branch Point Sequence:

AACCAATTAACG

Flanking Amino Acid:

PEEEVAQKKKISQKKLKKQK

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

72.3

37.6

Major BPS

67.7

0.44

58.3

38.4

Major PPT

69.9

0.45

0.9

62.5

34.6

Minor 5ss

33.2

-1.9

43.7

43.6

Minor BPS

47.5

-0.3

1.8

51.28

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008813

6030390 - 6033096

2707