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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_60458801_60474987_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60458801 - 60474987

Intron Length:

16187

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

ATTTCTTTCATT

Flanking Amino Acid:

ELVTGGELFDRIVEKGYYSE

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

29.3

Major BPS

87.6

0.93

0.9

89.3

Major PPT

81.6

0.71

0.8

77.3

31.5

Minor 5ss

41.9

-0.9

2.9

58.7

45.8

Minor BPS

69.2

0.69

1.7

85.82

34.8

Associated Gene:

Gene:

CAMK4

Ensembl Gene ID:

ENSAPLG00000013623

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036330

60370453 - 60528059

157607

ENSAPLT00000034170

60369519 - 60528059

158541

ENSAPLT00000017627

60370932 - 60528059

157128

ENSAPLT00000014231

60371146 - 60528059

156914

ENSAPLT00000038236

60370932 - 60528059

157128