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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_60514261_60517812_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60514261 - 60517812

Intron Length:

3552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGTTGC

5'SS Class:

major

3'SS Sequence:

TTATCGTCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

ATCTTGTTGACA

Flanking Amino Acid:

KTVCGTPGYCAPEILRGCAY

Intron Amino Acid Position:

384

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

67.6

38.6

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

79.6

0.67

0.9

73.7

36.7

Minor 5ss

46.8

-0.3

2.5

58.3

41.6

Minor BPS

53.7

0.11

2.1

67.65

39.1

Associated Gene:

Gene:

CAMK4

Ensembl Gene ID:

ENSAPLG00000013623

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038236

60370932 - 60528059

157128

ENSAPLT00000036330

60370453 - 60528059

157607

ENSAPLT00000034170

60369519 - 60528059

158541

ENSAPLT00000014231

60371146 - 60528059

156914