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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_60517889_60522736_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60517889 - 60522736

Intron Length:

4848

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTGCA

5'SS Class:

major

3'SS Sequence:

TTTATCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTCTTTTATCC

Flanking Amino Acid:

MWSLGIITYILLCGFEPFYD

Intron Amino Acid Position:

409

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.1

68.4

36.6

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

87.1

0.83

0.7

81.5

30.3

Minor 5ss

35.9

-1.6

3.2

51.5

44.9

Minor BPS

63.8

0.41

1.5

75.07

35.5

Associated Gene:

Gene:

CAMK4

Ensembl Gene ID:

ENSAPLG00000013623

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034170

60369519 - 60528059

158541

ENSAPLT00000017627

60370932 - 60528059

157128

ENSAPLT00000014231

60371146 - 60528059

156914

ENSAPLT00000038236

60370932 - 60528059

157128

ENSAPLT00000036330

60370453 - 60528059

157607