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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_60542801_60543322_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60542801 - 60543322

Intron Length:

522

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGCAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTGACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

TTTTCCTTGACA

Flanking Amino Acid:

TNYEDGLLTCGISLDYGEVR

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

65.7

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

83.1

0.74

0.9

80.2

31.9

Minor 5ss

31.2

-2.2

3.3

38.7

40.9

Minor BPS

91.6

1.3

0.7

94.88

20.6

Associated Gene:

Gene:

STARD4

Ensembl Gene ID:

ENSAPLG00000013793

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025213

60541605 - 60546554

4950

ENSAPLT00000014372

60542574 - 60548509

5936