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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_60543438_60544613_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

60543438 - 60544613

Intron Length:

1176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAAGACT

5'SS Class:

major

3'SS Sequence:

GTCACTCAACAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

TGTCACTCAACA

Flanking Amino Acid:

TMDIMETFEENCCVMRYTTA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

0.9

74.6

35.2

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

49.4

-0

1.1

46.6

39.7

Minor 5ss

28.8

-2.4

3.2

40.4

45.5

Minor BPS

58.6

0.27

1.8

71.77

39.3

Associated Gene:

Gene:

STARD4

Ensembl Gene ID:

ENSAPLG00000013793

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014372

60542574 - 60548509

5936

ENSAPLT00000025213

60541605 - 60546554

4950