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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_60623553_60624992_F

Intron Information:

Intron Rank:

146691

Intron Class:

major

Intron Phase:

Intron Coordinates:

60623553 - 60624992

Intron Length:

1440

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTGTTCTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAA

U12 Branch Point Sequence:

ATGTCTTGAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

71.5

41.1

Major BPS

74.6

0.61

65.6

41.4

Major PPT

80.9

0.7

0.8

80.4

31.6

Minor 5ss

45.7

-0.5

2.9

61.8

44.9

Minor BPS

67.6

0.63

1.4

79.02

37.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029029

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019278

60622746 - 60628387

5642

ENSAPLT00000034580

60622746 - 60628691

5946