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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_60773179_60773262_R


Intron Information:

Intron Rank:
23

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
60773179 - 60773262

Intron Length:
84

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAGAGACT

5'SS Class:
major

3'SS Sequence:
ATGTGTGTTCAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTGGAA

U12 Branch Point Sequence:
TTCTTTGGAAAA

Flanking Amino Acid:
IKTVQVSRFKGRN*

Intron Amino Acid Position:
676

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.4
0.53
1.1
69.4
41.1

Major BPS
62.2
0.3
1.4
63.4
44.3

Major PPT
60.4
0.23
1.2
56.7
47.3

Minor 5ss
32.9
-2
3.5
49
47

Minor BPS
45.2
-0.3
2.1
60.4
40

Associated Gene:

Gene:
EPB41L4A

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

60773167 - 60905292
132126