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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_61019208_61020260_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61019208 - 61020260

Intron Length:

1053

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATTCC

5'SS Class:

strong_major

3'SS Sequence:

ACTTTTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

TCTTTTGTCACT

Flanking Amino Acid:

TGYLEELEKESYSRSLIMES

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

78.2

30.3

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

88.3

0.86

0.7

80.8

36.2

Minor 5ss

40.8

-1

2.8

53.7

43.5

Minor BPS

48.3

-0

2.4

74.22

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001412

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034779

61000881 - 61061186

60306

ENSAPLT00000017191

61000881 - 61061186

60306