Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_6102411_6137536_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6102411 - 6137536

Intron Length:

35126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATATA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTCTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

LHQYAAQRIISLFSLLSKKH

Intron Amino Acid Position:

487

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

89.5

23.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

92.4

0.95

0.6

85.4

29.3

Minor 5ss

38.7

-1.3

2.9

50.9

45.5

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

DYM

Ensembl Gene ID:

ENSAPLG00000007759

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008119

6043214 - 6201879

158666