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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_61027076_61030113_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61027076 - 61030113

Intron Length:

3038

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CTTCAAATTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TGTCCTTCAAAT

Flanking Amino Acid:

RIDSLPLTENFSLQTDMTRR

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

83.5

27.9

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

75.2

0.57

0.9

70.8

38.5

Minor 5ss

38.5

-1.3

2.8

50.4

39.3

Minor BPS

58.4

0.34

1.7

76.28

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001412

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047575

61000881 - 61060864

59984

ENSAPLT00000034779

61000881 - 61061186

60306

ENSAPLT00000017191

61000881 - 61061186

60306

ENSAPLT00000001777

61000881 - 61061186

60306