Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_61054114_61054618_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

61054114 - 61054618

Intron Length:

505

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTATA

5'SS Class:

strong_major

3'SS Sequence:

TACTTAACACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

AATTACTTAACA

Flanking Amino Acid:

SSLIATNEDHRQILRENSCL

Intron Amino Acid Position:

653

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

88.8

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

65.3

0.35

57.3

Minor 5ss

45.4

-0.5

2.5

59.5

45.1

Minor BPS

75.9

0.81

1.4

80.66

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001412

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034779

61000881 - 61061186

60306

ENSAPLT00000017191

61000881 - 61061186

60306

ENSAPLT00000001777

61000881 - 61061186

60306

ENSAPLT00000047575

61000881 - 61060864

59984